Rapid Identification of Neutralizing Antibodies against SARS-CoV-2 Variants by mRNA Display
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Highlights (3 to 4 main points)oBroadly-reactive neutralizing antibodies (nAbs) may overcome SARS-CoV-2 variant escape
omRNA display is used to rapidly identify SARS-CoV-2 spike (S) protein-directed nAbs
oStructural studies reveal distinct binding modes for several identified antibodies
oAn engineered nAb sustains binding to variant Gamma E484K and Delta L452R spike
SummaryThe increasing prevalence of SARS-CoV-2 variants with the ability to escape existing humoral protection conferred by previous infection and/or immunization necessitates the discovery of broadly-reactive neutralizing antibodies (nAbs). Utilizing mRNA display, we identify a set of antibodies against SARS-CoV-2 spike (S) proteins and characterize the structures of nAbs that recognize epitopes in the S1 subunit of the S glycoprotein. These structural studies reveal distinct binding modes for several antibodies, including targeting of rare cryptic epitopes in the receptor-binding domain (RBD) of S that interacts with angiotensin-converting enzyme 2 (ACE2) to initiate infection, as well as the S1 subdomain 1. Further, we engineer a potent ACE2-blocking nAb to sustain binding to S RBD with the E484K and L452R substitutions found in multiple SARS-CoV-2 variants. We demonstrate that mRNA display is a promising approach for the rapid identification of nAbs that can be used in combination to combat emerging SARS-CoV-2 variants.
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(C) 2022 The Authors.
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